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Week: 22 October 2018 - 28 October 2018

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Courses

Date Time Speaker Room 22 October 2018 8:30 - 9:30 'Registration' Aula Dini 9:30 - 10:15 Yuval Garini 'Chromatin matrix – possible nuclear functional structure' Aula Dini 10:15 - 10:45 'Coffee break' Aula Dini 10:45 - 11:30 jean-marc VICTOR 'Some polymer physics tools for chromosome image analysis' Aula Dini 11:30 - 12:15 Maria Barbi 'Drosophila Epigenetic Domains at the Crossover of Polymer Coil-Globule Transition' Aula Dini 12:15 - 13:00 Andrew Spakowitz 'Theoretical Modeling of the Spreading of Epigenetic Marks and Chromosomal Organization' Aula Dini 14:30 - 15:15 Daniel Jost 'Epigenome Folding: A Main Driver of 3D Chromatin Organization' Aula Dini 15:15 - 15:45 'Coffee break' Aula Dini 15:45 - 16:30 Alain Arneodo 'Evidence of Selection for a ``Critical’’ Nucleosomal Array across Vertebrates' Aula Dini 16:30 - 17:15 David Holcman 'Polymer models for nuclear organization and function' Aula Dini 25 October 2018 9:30 - 10:15 Davide Marenduzzo 'Biophysical principles of chromosome organisation: bridging-induced attaraction and diffusive loop extrusion' Aula Dini 10:15 - 10:45 'Coffee break' Aula Dini 10:45 - 11:30 Marco Di Stefano 'Exploring the Time-Dependent Structural Rearrangements of Reprogramming Loci in Mouse using the TADdyn Tool' Aula Dini 11:30 - 12:15 Mikhail Tamm 'Gaussian Network Approach to the Description of Topological Constraints in the Chromatin' Aula Dini 12:15 - 13:00 Francesco Ferrari 'Extracting Information on Multiscale Chromatin Organization from Hi-C Data' Aula Dini 14:30 - 15:15 Geoffrey Fudenberg 'Formation of a Meiotic Loop Array via Extrusion in S. Cerevisiae' Aula Dini 15:15 - 15:45 'Coffee break' Aula Dini 15:45 - 16:30 Ivan Junier 'Functional Insight into the Hierarchical Structuring of Bacterial Chromosomes' Aula Dini 16:30 - 17:15 Angelo Rosa '"Chromosomes-Inspired" Polymer Physics' Aula Dini 26 October 2018 9:30 - 10:15 Olga Dudko 'On the Border of Order: Orchestration of Remote Genomic Interactions in Space and Time' Aula Dini 10:15 - 10:45 'Coffee break' Aula Dini 10:45 - 11:30 Gero Wedemann 'Effects of changes of nucleosome positioning and internucleosomal interactions on small and large chromatin chains' Aula Dini 11:30 - 12:15 Ernest D. Laue 'Single-Cell Hi-C and Single-Molecule Imaging to Study Nuclear Architecture' Aula Dini 12:15 - 12:30 'Concluding remarks' Aula Dini 23 October 2018 9:30 - 10:15 Noam Kaplan 'Explicit Probabilistic Models of the 3D Genome' Aula Dini 10:15 - 10:45 'Coffee break' Aula Dini 10:45 - 11:30 Ralf Everaers 'Statistical Physics of Chromosomr Crampling' Aula Dini 11:30 - 12:15 Anais Cheblal 'Histone Density and Double Strand Break Mobility: Factors Controlling Mobility and Accessibility During Homology Search' Aula Dini 12:15 - 13:00 Karine Dubrana 'Saccharomyces Cerevisiae Chromosome Ends are Highly Mobile and Behave as Free Polymer Extremities' Aula Dini 14:30 - 15:15 Alexandre Morozov 'The role of Mediator in higher-order chromatin structure' Aula Dini 15:15 - 15:45 'Coffee break' Aula Dini 15:45 - 16:30 Ofir Shukron 'Multi-scale Chromatin Organization and Dynamic Revealed by Randomly Cross-linked Polymer Models' Aula Dini 16:30 - 17:15 Andrew Seeber 'Chromosome Dynamics in Response to DNA Damage' Aula Dini 24 October 2018 9:00 - 9:45 Mario Nicodemi 'Polymer Physics Predicts the Effects on Chromatin Architecture of Disease Associated Structural Variants' Aula Dini 9:45 - 10:30 Marco Cosentino-Lagomarsino 'Bacterial chromosomes: specific behavior and general lessons' Aula Dini 10:30 - 11:00 'Coffee break' Aula Dini 11:00 - 11:45 Kerstin Bystricky 'Insights from Real Time Imaging of DNA Dynamics in Human Cells' Aula Dini 11:45 - 12:30 Benjamin Audit 'Emergence of the Spatio-Temporal Replication Program: Role of Origin Distribution Heterogeneity and 3D Chromatin Structure' Aula Dini 12:30 - 13:15 Assaf Amitai 'Diffusion of nuclear proteins and its link to 3d chromatin organization' Aula Dini 14:00 - 15:00 Stefano Olla 'Hydrodynamic limits in hyperbolic scaling' Sala Conferenze Centro De Giorgi

Visits

Irene Adroher-Benítez

Scuola Internazionale Superiore di Studi Avanzati (SISSA)
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Assaf Amitai

MIT, Cambridge
15 October 2018 - 30 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Alain Arneodo

University of Bordeaux, CNRS
21 October 2018 - 27 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Benjamin Audit

Laboratoire de Physique, CNRS, Ecole Normale Supérieure de Lyon
21 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Maria Barbi

LPTMC - Sorbonne Université - Paris
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Younus Ahmad Bhat

University of Kashmir
20 October 2018 - 27 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Kerstin Bystricky

University of Toulouse
21 October 2018 - 25 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Marco Cosentino-Lagomarsino

IFOM, Milan and University of Milan
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Marco Di Stefano

Centre Nacional d’Anàlisi Genòmica - Centre de Regulació Genòmica (CNAG-CRG)
21 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Karine Dubrana

CEA/INSERM/iRCM, Paris Saclay
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Olga Dudko

University California-San Diego, USA
21 October 2018 - 27 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Francesco Ferrari

IFOM, the FIRC Institute of Molecular Oncology
21 October 2018 - 27 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Stefano Franzini

SISSA
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Geoffrey Fudenberg

UCSF
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Kazumasa Fujiwara

Tohoku University
2 October 2017 - 1 October 2019 (2017 Junior Visiting Positions)

Yuval Garini

Bar Ilan University
21 October 2018 - 28 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Surya Ghosh

University of Grenoble Alpes
21 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

David Holcman

ENS Paris
16 September 2018 - 3 November 2018 (Probabilistic methods in statistical physics for extreme statistics and rare events)

Daniel Jost

CNRS - University Grenoble-Alpes - TIMC-IMAG
21 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Ivan Junier

CNRS, TIMC-IMAG
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Noam Kaplan

Technion
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Dubrana Karine

CEA/INSERM
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Davide Marenduzzo

University of Edinburgh
24 October 2018 - 27 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Jessica Elisa Massetti

Centro di Ricerca Matematica Ennio De Giorgi
1 October 2018 - 30 September 2020 (2018 Junior Visiting Positions)

Martin Gebhard Mayer

Università di Roma Tor Vergata
15 May 2017 - 14 May 2019 (2017 Junior Visiting Positions)

Alessandra Merlotti

Università di Bologna
25 October 2018 - 25 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Alexandre Morozov

Department of Physics & Astronomy, Rutgers University
21 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Naeem Muhammad

University of Rome La Sapienza
2 December 2013 - 6 December 2103 (Deterministic and Stochastic Dynamics in Economics and Finance)

Stefano Olla

CEREMADE, Université Paris Dauphine
24 October 2018 - 24 October 2018 (Seminari di Sistemi Dinamici Olomorfi 2018-2019)

Nicola Orru

University of Cagliari
30 June 2013 - 7 July 2913 (Linear and Nonlinear Hyperbolic Equations)

Andrea Papale

Sissa
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Sven Pistre

PhD student at Institute for Mathematics, RWTH Aachen University
20 May 2018 - 25 November 2018 (New Methods in Finsler Geometry)

Daniel Remondini

Department of Physics and Astronomy, Bologna University
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Angelo Rosa

SISSA, Trieste
21 October 2018 - 27 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Andrew Seeber

Harvard University
21 October 2018 - 25 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Ofir Shukron

Ecole Normale Superieure, Paris
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Anton Solomko

NAS Ukraine
1 September 2017 - 31 August 2019 (2017 Junior Visiting Positions)

Andrew Spakowitz

Stanford University, USA
20 October 2018 - 28 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Mikhail Tamm

Moscow State Uiversity
20 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Francesco Veneziano

Universität Basel
1 March 2018 - 28 February 2020 (2017 Junior Visiting Positions)

jean-marc VICTOR

CNRS Sorbonne Université
22 October 2018 - 26 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Gero Wedemann

University of Apllied Sciences Stralsund
20 October 2018 - 27 October 2018 (Multiscale analysis and reconstruction of chromatin and nuclear organization)

Ruijun Wu

Centro di Ricerca Matematica Ennio De Giorgi
1 October 2018 - 30 September 2020 (2018 Junior Visiting Positions)